
Package index
Create rasters
Functions used to define and create refugia rasters. These should be run in descending order.
-
build_stress()
- Create annual stress % rasters
-
build_refugia()
- Build rasters of binary refugia
-
build_persist()
- Build rasters of persistent refugia
-
build_delta()
- Build rasters of persistent refugia
-
viz_stress()
- Map of % of year stressed
-
viz_refugia()
- Map of refugia per year
-
viz_persist()
- Map of persistence of refugia
-
viz_delta()
- Map of delta refugia
-
ts_viz_percentdays()
- Plot percent of days meeting refugia conditions over time
-
ts_viz_refugia()
- Plot proportion of year meeting refugia conditions over time
-
read_shp()
- Read in shapefiles provided by this package
Datasets
These are internal datasets specific to our project, and are required for running package examples.
-
extent_list
- List of extents for case study regions
-
percentdays
- Example dataset of % days of stress
-
cali_rast()
- ROMS 3km California subsetted to 100m depth